Attention: Confluence is not suitable for the storage of highly confidential data. Please ensure that any data classified as Highly Protected is stored using a more secure platform.
If you have any questions, please refer to the University's data classification guide or contact ict.askcyber@sydney.edu.au
MR Solutions 3T & 7T MRI
- Ryan Sullivan
- fan.zhang2 (Unlicensed)
For ICT configuration, see: https://sydneyuni.atlassian.net/wiki/spaces/RC/pages/789577914
For the Upload Tool Config, see: https://bitbucket.org/radiologics/sydney_upload_scripts/src/master/
[Series ID] should be used for matching files.
The Project field should filled with the XNAT shortcode (EZBooking Project ID) and the Subject field will be filled with the project name.
(Note: For the new project created through DashR, the XNAT shortcode should be at least 3 digits/characters and less than 20 digits/characters. If less than 3 digits, zeros should be added at the beginning. For example, XNAT shortcode 044 for EZBooking Project ID 44)
Metadata
Instrument Source | Logic | Config Source | XNAT Destination |
|---|---|---|---|
(0010,0010) | [Project]:* | - | [Project] |
(0010,0010) | *:[Subject] | - | [Subject] |
(0008,0020) | [YYYYMMDD] |
| [Session] |
(0008,0050) | [Subject Accession Number] | - |
|
- | - | 3T: 10.25910/5cf9e65ffa8c4 7T: 10.25910/5cf9f821b4c94 | [IID] TBD |
- | - | TBD | [QCPID] TBD |
TBC | - | - | Date |
Timestamp (0008,0032) TBC | - | - | Time |
Acquisition Duration (0018,9073) | - | - | TBD |
Protocol Name (0018,1030)/Sequence Name (0018,0024) | - | - | TBD |
- | - | - | Operator |
(0008,1010) Station Name | - | - | Scanner Name |
(0008,1090) Manufacturer’s Model Name | - | - | Scanner Type |
- | - | Sydney Imaging | Acquisition Site |
Data
Original Structure | Note | XNAT Structure | XNAT File Type |
|---|---|---|---|
D:\smis\dev\Data\[Subject ID]\DICOM\[Series]\[1]\“[Series]_[ScanX]” | DICOM | \Session\[Series]\ | DICOM |
D:\smis\dev\Data\[Subject ID]\Image\[Series]\[1]\”[Series]_[ScanX]“ | SUR | \Session\[Series]\ | SUR |
D:\smis\dev\Data\[Subject ID]\Image\[Series]\“patient[Subject ID]_scan[Series]” | PET (log) |
|
|
D:\smis\dev\Data\[Subject ID]\Image\[Series]\[Reconstruction]\”[Series]_stuff” | PET (Reconstructed) |
|
|
D:\smis\dev\Data\[Subject ID]\Spectroscopy\[Series]\”[Series]_0” | Spectroscopy | \Session\[Series]\ | MRD, SPR |
D:\smis\dev\MRD\[Subject ID]\Image\[Series]\”[Series]_0” D:\smis\dev\MRD\[Subject ID]\Image\[Series]\”[Series]_0_o” D:\smis\dev\MRD\[Subject ID]\Image\[Series]\”btable.txt” D:\smis\dev\MRD\[Subject ID]\Image\[Series]\”rtable.txt” | MRD, RPR, rtv | \Session\[Series]\ | MRD, RPR MRD, RPR btable rtable |
D:\smis\dev\PetRaw\[Subject ID]\[Series]\”pet_[Series]” | PET (RAW) |
|
|