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XNAT is an imaging-based platform that is currently used to archive and store raw scans. All original MRI sequences (T1, DWI, fMRI, etc.) are stored in XNAT as a DICOM and niftii format. XNAT is used for storing raw scans, viewing scans, and downloading scans in preparation for pre-processing.
User guide: XNAT (Imaging Data Service)user guide
Registration: Require registration to XNAT (via XNAT website) and access to Frontier project (contact Sophie/James/Ramon).
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Each supervisor (Fiona, Muireann and Ramon) also maintains a private desktop. Each private desktop can only hold one user at any one time. To gain access to these desktops, please contact the relevant supervisor.
User guide: Argus User Guide ARGUS user guide
Registration: Contact the relevant supervisor to gain access to their desktop.
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The RDS is the main location where you should be storing all project information and data. All information in the RDS is backed up and securely stored. However, no heavy processing/analysis can be conducted on the RDS.
User guide: Research Data Store RDS user guide
Registration: Contact supervisor to create a dashr project.
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Artemis is a high-performance computing (HPC) cluster that is used for advanced computing tasks, such as modelling, batch data processing and analysis. All neuroimaging processing and analysis must be conducted on Artemis on the /scratch/project folder. However, you should not store data here in the long term, as this space is only for active processing and is not safely secured/backed up. Therefore, after the processing and analysis of a project is completed, this data should be moved into the RDS and deleted from scratch.
User guide: Artemis User Guideuser guide
Registration: Contact supervisor to create a dashr project.
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