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module load freesurfer/7.0.1 |
2. export subjects directory (Identify the directory where in which your subject folders are located)(in FreeSurfer format) are located
e.g. If your subjects are located in a structure that looks like this:
-scratch
-Project
-FreeSurferSubjectFolder
-subject_1
-subject_2
-subject_3
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export SUBJECTS_DIR=/scratch/project/FreeSurferSubjectFolder |
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