Page Comparison

3D-Caffe, Caffe, Caffe2, libgpuarray, Mxnet, OpenCV, Root, Stxxl, TensorFlow, Torch

Abaqus, Ansys, AnsysEM, CGNS, Gurobi, LS-DYNA, LS-PrePost, Nastran, OpenFOAM, Yade

Abricate, Abyss, Abyss-mpi, AdapterRemoval, AfterQC, Aligngraph, AlleleSeq, Allpathslg, AmrPlusPlus, Annovar, Aragorn, armatus, Artemis, ArtificialFastqGenerator, Augustus, bam-readcount, Bambamc, Bamtools, barrnap, BASE, Basespace, BayesAss, Bbmap, BCFtools, Bcl2fastq, Beagle, Beast, BEDOPS, Bedtools, biobambam2, Biopieces, Bismark, Blasr, Blast, BLAST+, Blat, BlobTools, Bowtie, Bowtie2, bpp, Bracken, BRAKER1, BRAKER2, Brig, Busco, Bvatools, BWA, Canu, Cap3, Cd-Hit, Centrifuge, Chimera, Chimeraslayer, ChunkChromosome, Clonalframeml, Clustal Omega, Clustal W/X, Codonphyml, Cortex, Crest, Cufflinks, Cutadapt, Delly, Diamond, Drive5, Ea-Utils, EDirect, Emboss, EMMAX, EPA-ng, Epacts, EVidenceModeler, ExaBayes, EXCAVATOR2tool, exonerate, Falcon, Falcon-Unzip, Fastml, fastPHASE, FastQC, Fasttree, Fastx, Flash, fqgrep, fqtools, FRANz, freebayes, funannotate, gatb, Gatk, Gblocks, gcta, gem-tools, Gemma, GeneMark-ES, Genomemasker, GenomeTools, Gess, giremi, gmap, GraPhlAn, GraPhlAn, GRIDSS, Gubbins, Haddock, hapcut, Hapcut, Hapflow, haplotyper, Haploview, Hapsembler, Hh-Suite, HiC-bench, HISAT2, hlascan, Hmmer, Homer, hotspotter, Htslib, I-Tasser, Idba, idp, Igvtools, IMPUTE2, Infernal, IQ-TREE, Is_Mapper, ITSx, Iva, Jaspa, Jellyfish, Juicer, Kalign, kallisto, Kat, kentutils, Kmc, Kraken, Kraken2, LAST, libmaus2, lighter, Lofreq, longranger, lordec, Lumpy-Sv, MACH, MaCH-Admix, MAFFT, Magic-BLAST, Maker, Manta, MARVEL, Mash, MATAM, Mauve, Medusa, Megacc, Megahit, megan, Meme, MetaPhlAn2, Metatissue, Methpipe, MethylDackel, Migrate-N, minced, Minimac2, Minimac4, Minimap2, Mira, Mirdeep2, Mlst, Mothur, Mrbayes, Mugsy, Mummer3, Mummer4, Mutect, Mykrobe-Predictor, NanoOk, Nanopolish, NCBI C++ Toolkit, Newick-Utils, Norgal, Nullarbor, oases, Paml, pandaseq, Pblat, Pear, PennCNV, pgdspider, phase, Pheniqs, PHYLIP, Phyml, Picard, Pilon, Pindel, Pipits, PLINK, PneumoCaT, Prank, Preseq, Prinseq, Prodigal, Prokka, ProteinOrtho, PSIPRED, PSMC, Purge Haplotigs, Qiime, Qorts, Qualimap, Quast, Ragout, Ray, Rdpclassifier, Reddog, Repeatmasker, Repeatmodeler, RepeatScout, Rmats, Rnammer, Roary, Rosetta, Rsem, salmon, sam2bam, Sambamba, Samblaster, samclip, Samtools, scotti, seqOutBias, Seqtk, sff2fastq, Sga, SHAPEIT, Shorah, ShortStack, shovill, Sibelia, Signalp, SKESA, Smalt, Smrt, Snippy, snp-dists, SNPhylo, SOAPdenovo2, SortMeRNA, Spades, SpeedSeq, Sratoolkit, STACKS, Stampy, Star, Strainseeker, Strelka, Stringtie, subread, Subread, Supernova, Surpi, Svtyper, Tabix, Tbl2Asn, Tophat, Tracer, Transdecoder, trimAl, Trimgalore, Trimmomatic, Trinity, Trinotate, tRNAscan-SE, UCSC Genome Browser, Usearch, Varscan, VaST, vcf2diploid, Vcftools, Velvet, ViennaRNA, Vmatch, Vsearch, WALT, Wgs, wgsim, XP-EHH

afni, Amos, ANTs, ASHS, c3d, Conn, dcm2niix, Dcmtk, DTI-TK, Fix, Freesurfer, Fsl, Gamos, Gate, MIPAV, MRtrix3, rtk

Ag, Aria2, Autoconf, Automake, Bzip2, curl, Cyberduck, Gdc-Client, Gettext, gtextutils, jq, Libunistring, Lzma, M4, Mawk, Pandoc, pigz, RapidJSON, Readline, Snappy, Xdrfile

Anaconda, Anaconda2, Argtable2, Bazel, Binutils, Bison, Cmake, Dbus, Dbus-Glib, Doxygen, Expat, Flex, Fontconfig, Gdl, Gflags, Git, Glib, Graphviz, Guile, Icmake, Icu, Jupyter, Leveldb, Libcroco, Libcurl, Libffi, Libgc, Libmng, Libspatialite, Libspectre, Libtau, Libtiff, Libtool, Libxml2, Libxslt, Luabind, Luajit, Maven, Mercurial, Ncurses, Node, Pango, Pcre, Pcre2, Protobuf, Raxml, Raxmls, Scons, Slang, Sparsehash, Spatialite, Sphinx, Subversion, Swig, tre, Udunits, Vcflib, Xmlto, Yasm

Ann, Epimine, Gephi, Glog, Harfbuzz, libevent, Lmdb, Modeller, Mono, MTBseq, OpenSSL, Osrm, Readosm, tmux, yaml-cpp

Ant, GadgetViewer, Geant4, Tomographer, wcslib

Armadillo, Arpack-Ng, Atlas, Baps, Blas, Boost, Cblas, Cddlib, CGAL, Clhep, Eigen, Eigenvalue SoLvers for Petaflop-Applications (ELPA), FFTW, Geos, GHMM, Gmp, Gsl, GTS, Highwayhash, HYPRE, Lapack, Libmatheval, Libsodium, libspatialindex, Loki, Lsd, METIS, Mpc, Mpfr, Nettle, Nlopt, OpenBLAS, Qhull, Routino, ScaLAPACK, Suitesparse

Biogeme, Go, Jags, Mcl, Netgen, Netlogo, Underworld 2

Cairo, cairomm, Circos, Ffmpeg, FreeGLUT, Freetype, Ghostscript, Gnuplot, Graphicsmagick, Idl, Imagej, Imagemagick, Imp, Jasper, Libgd, Libjpeg, Libpng, libQGLViewer, MayaVi, OpenJPEG, Paraview, Photoscan-Pro, Pixman, Plplot, Poppler, Povray, Pslib, Simple, Visit, Vmd, Vtk

cfitsio, Freexl, GL2PS, HDF5, Hiredis, Intltool, Libelf, Ncview, NetCDF, Xz, Zlib

Cuda, Cuda2, Gperftools, Intel-MPI, Mpich, MVAPICH2, OpenMPI-gcc, OpenMPI-Intel, OpenMPI-PGI, Parallel, Spark, Tbb, Zeromq

Dlpoly, Exciting, gaussian, Gromacs, Gromacs-Plumed, Hoomd, Lammps, LIGGGHTS-PUBLIC, LIGGGHTS-with-bonds, Macs, Molpro, Namd, Plumed, Pymol, Qe, Siesta, XCrySDen

Ec2-Api-Tools

Armadillo, Arpack-Ng, Atlas, Baps, Blas, Boost, Cblas, Cddlib, CGAL, Clhep, Eigen, Eigenvalue SoLvers for Petaflop-Applications (ELPA), FFTW, Geos, GHMM, Gmp, Gsl, GTS, Highwayhash, HYPRE, Lapack, Libmatheval, Libsodium, libspatialindex, Loki, Lsd, METIS, Mpc, Mpfr, Nettle, Nlopt, OpenBLAS, Qhull, Routino, ScaLAPACK, Suitesparse

emacs

Gcc, Intel, Java, Pgi

Gdal, Proj, Proj.4, Rgdal, VAPOR, Virtualpg

Gdb, Re2, Valgrind

Julia, Lua, Nextflow, nim, Octave, Perl, Python, Qt, Qwt, R, Rstudio, Ruby, Scala, Tcl, Tk

Macaulay2, Mathematica, Matlab, Mcr, petsc, PHCpack, SAS

MySQL, Pgsql, Sqlite