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Official mrtrix3 documentation can be found here. It is advised you follow the official documentation as it is updated frequently by the developers.

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The following pages are written as rough guide/documentation for some of the pipelines that are currently being used specifically for certain sequences obtained in Frontier (these pipelines are not suitable for ALL scans). For official pipelines, refer to the tutorials and workflows on the mrtrix3 docs e.g. for quantitative analysis, or FBA. To view a custom pipeline made specifically for certain Frontier scans (FTD0001-FTD12##)The pages listed in the space below are custom pipelines created for certain sequences obtained in Frontier (these pipelines are not suitable for ALL scans). Specifically, the pipeline is customised for FTD0001-FTD12##.